VU Gyvybės mokslų centro autoriaus 'Indrė Dalgėdienė' publikacijų sąrašas

2025
1 Bulavaitė, Aistė; Dapkūnas, Justas; Reškevičiūtė, Raminta; Dalgėdienė, Indrė; Valančauskas, Lukas; Baranauskienė, Lina; Plečkaitytė, Milda. Gardnerella fibrinogen-binding protein as a candidate adherence factor // Frontiers in cellular and infection microbiology. Lausanne : Frontiers Media SA. ISSN 2235-2988. eISSN 2235-2988. 2025, vol. 15, art. no. 1556232, p. [1-9]. DOI: 10.3389/fcimb.2025.1556232.s001. [DB: Science Citation Index Expanded (Web of Science), Scopus]

2024
1 Liustrovaitė, Viktorija; Drobysh, Maryia; Ratautaitė, Vilma; Ramanavičienė, Almira; Rimkutė, Agnė; Simanavičius, Martynas; Dalgėdienė, Indrė; Kučinskaitė-Kodzė, Indrė; Plikusienė, Ieva; Chen, Chien-Fu; Viter, Roman; Ramanavičius, Arūnas. Electrochemical biosensor for the evaluation of monoclonal antibodies targeting the N protein of SARS-CoV-2 virus // Science of the total environment. Amsterdam : Elsevier B.V. ISSN 0048-9697. 2024, vol. 924, art. no. 171042, p. 1-9. DOI: 10.1016/j.scitotenv.2024.171042. [DB: Elsevier Biobase, Embase, CSA Technology Research Database, Science Citation Index Expanded (Web of Science), Scopus] [IF: 8.000; AIF: 5.500; Q1 (2024 InCities JCR SCIE)]
2 Bigelytė, Greta; Duchovska, Brigita; Žedaveinytė, Rimantė; Sasnauskas, Giedrius; Šinkūnas, Tomas; Dalgėdienė, Indrė; Tamulaitienė, Giedrė; Šilanskas, Arūnas; Kazlauskas, Darius; Valančauskas, Lukas; Madariaga-Marcos, Julene; Seidel, Ralf; Šikšnys, Virginijus; Karvelis, Tautvydas. Innate programmable DNA binding by CRISPR-Cas12m effectors enable efficient base editing // Nucleic acids research. Oxford : Oxford University Press. ISSN 0305-1048. eISSN 1362-4962. 2024, vol. 52, iss. 6, p. 3234-3248. DOI: 10.1093/nar/gkae016. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 13.100; AIF: 5.300; Q1 (2024 InCities JCR SCIE)]
3 Avižinienė, Aliona; Dalgėdienė, Indrė; Armalytė, Julija; Petraitytė-Burneikienė, Rasa. Immunogenicity of novel vB_EcoS_NBD2 bacteriophage-originated nanotubes as a carrier for peptide-based vaccines // Virus research. Amsterdam : Elsevier B.V. ISSN 0168-1702. eISSN 1872-7492. 2024, vol. 345, art. no. 199370, p. [1-10]. DOI: 10.1016/j.virusres.2024.199370. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 2.700; AIF: 3.700; Q2 (2024 InCities JCR SCIE)]
4 Dalgėdienė, Indrė; Bulavaitė, Aistė; Reškevičiūtė, Raminta; Ivanauskas, Danas; Žvirblienė, Aurelija; Plečkaitytė, Milda. Antibody-based approaches for studying potential adhesion proteins of Gardnerella spp. // European journal of immunology: Special issue: 7th European conference of immunology, 1–4 September, 2024, Dublin, Ireland. Weinheim : WILEY-VCH Verlag GmbH. ISSN 0014-2980. eISSN 1521-4141. 2024, vol. 54, iss. S1, p. 700. DOI: 10.1002/eji.202470200. [DB: Science Citation Index Expanded (Web of Science)] [IF: 3.700; AIF: 5.000; Q2 (2024 InCities JCR SCIE)]
5 Inčiūraitė, Rūta; Ramonaitė, Rima; Kupčinskas, Juozas; Dalgėdienė, Indrė; Kulokienė, Ugnė; Kiudelis, Vytautas; Varkalaitė, Greta; Žvirblienė, Aurelija; Jonaitis, Laimas Virginijus; Kiudelis, Gediminas; Franke, Andre; Schreiber, Stefan; Juzėnas, Simonas; Skiecevičienė, Jurgita. The microRNA expression in crypt-top and crypt-bottom colonic epithelial cell populations demonstrates cell-type specificity and correlates with endoscopic activity in ulcerative colitis // Journal of Crohn's and colitis. Oxford : Oxford University Press. ISSN 1873-9946. eISSN 1876-4479. 2024, vol. 18, iss. 12, p. 2033-2044. DOI: 10.1093/ecco-jcc/jjae108. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 8.700; AIF: 5.100; Q1 (2024 InCities JCR SCIE)]

2023
1 Lučiūnaitė, Asta; Dalgėdienė, Indrė; Vasiliūnaitė, Emilija; Norkienė, Milda; Kučinskaitė-Kodzė, Indrė; Žvirblienė, Aurelija; Gedvilaitė, Alma. Immunogenic properties and antigenic similarity of virus-like particles derived from human polyomaviruses // International journal of molecular sciences. Basel : MDPI. ISSN 1661-6596. eISSN 1422-0067. 2023, vol. 24, iss. 5, art. no. 4907, p. [1-18]. DOI: 10.3390/ijms24054907. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 4.900; AIF: 5.650; Q1 (2023 InCities JCR SCIE)]

2022
1 Lučiūnaitė, Asta; Dalgėdienė, Indrė; Žilionis, Rapolas; Mašalaitė, Kristina; Norkienė, Milda; Šinkūnas, Andrius; Gedvilaitė, Alma; Kučinskaitė-Kodzė, Indrė; Žvirblienė, Aurelija. Activation of NLRP3 inflammasome by virus-like particles of human polyomaviruses in macrophages // Frontiers in immunology. Lausanne : Frontiers media SA. eISSN 1664-3224. 2022, vol. 13, art. no. 831815, p. [1-23]. DOI: 10.3389/fimmu.2022.831815. [DB: Science Citation Index Expanded (Web of Science), Scopus]

2020
1 Lučiūnaitė, Asta; McManus, Róisín M; Jankunec, Marija; Rácz, Ildikó; Dansokho, Cira; Dalgėdienė, Indrė; Schwartz, Stephanie; Brosseron, Frederic; Heneka, Michael T. Soluble Aβ oligomers and protofibrils induce NLRP3 inflammasome activation in microglia // Journal of neurochemistry. Hoboken : Wiley. ISSN 0022-3042. eISSN 1471-4159. 2020, vol. 155, no. 6, p. 650-661. DOI: 10.1111/jnc.14945. [DB: MEDLINE, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 5.372; AIF: 5.311; Q1 (2020 InCities JCR SCIE)]
2 Mickiene, Gitana; Dalgėdienė, Indrė; Zvirblis, Gintautas; Dapkunas, Zilvinas; Plikusiene, Ieva; Bužavaitė-Vertelienė, Ernesta; Balevičius, Zigmas; Rukšėnaitė, Audronė; Plečkaitytė, Milda. Human granulocyte-colony stimulating factor (G-CSF)/stem cell factor (SCF) fusion proteins: design, characterization and activity // PeerJ. London : PeerJ Inc. eISSN 2167-8359. 2020, vol. 8, art. no. c9788, p. 1-23. DOI: 10.7717/peerj.9788. [DB: Biological Abstracts, PubMed, Embase, Scopus, Science Citation Index Expanded (Web of Science)]
3 Bulavaitė, Aistė; Dalgėdienė, Indrė; Michailovienė, Vilma; Plečkaitytė, Milda. Type II restriction-modification system from Gardnerella vaginalis ATCC 14018 // Pathogens. Basel : MDPI. eISSN 2076-0817. 2020, vol. 9, iss. 9, art. no. 703, p. [1-18]. DOI: 10.3390/pathogens9090703. [DB: PubMed, Embase, Scopus, Science Citation Index Expanded (Web of Science)]
4 Špakova, Aliona; Dalgėdienė, Indrė; Insodaitė, Rasa; Sasnauskienė, Aušra; Žvirblienė, Aurelija; Petraitytė-Burneikienė, Rasa. vB_EcoS_NBD2 bacteriophage-originated polytubes as a carrier for the presentation of foreign sequences // Virus research. Amsterdam : Elsevier BV. ISSN 0168-1702. eISSN 1872-7492. 2020, vol. 290, art. no. 198194, p. [1-9]. DOI: 10.1016/j.virusres.2020.198194. [DB: MEDLINE, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 3.303; AIF: 4.611; Q3 (2020 InCities JCR SCIE)]

2018
1 Dalgėdienė, Indrė; Lučiūnaitė, Asta; Žvirblienė, Aurelija. Activation of macrophages by oligomeric proteins of different size and origin // Mediators of inflammation. London : Hindawi Ltd. ISSN 0962-9351. eISSN 1466-1861. 2018, vol. 2018, art. ID 7501985, p. [1-13]. DOI: 10.1155/2018/7501985. [DB: MEDLINE, Academic Search Complete, BIOSIS Previews, Current Contents, Embase, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 3.545; AIF: 5.228; Q2 (2018 InCities JCR SCIE)]

2017
1 Lučiūnaitė, Asta; Dalgėdienė, Indrė; Žvirblienė, Aurelija. Activation of macrophages with various structure oligomers and their immune complexes // Open Readings 2017 : 60th International conference for students of physics and natural sciences, March 14-17, 2017, Vilnius, Lithuania : programme and abstracts. Vilnius : Vilniaus universitetas. ISSN 2029-4425. 2017, p. 100. Prieiga per internetą: <http://www.openreadings.eu/wp-content/uploads/2017/03/OR2017_abstracts_book.pdf> [žiūrėta 2017-07-18].
2 Mickienė, Gitana; Dalgėdienė, Indrė; Dapkūnas, Žilvinas; Žvirblis, Gintautas; Pesliakas, Jonas Henrikas; Kaupinis, Algirdas; Valius, Mindaugas; Mištinienė, Edita; Plečkaitytė, Milda. Construction, purification, and characterization of a homodimeric granulocyte colony-stimulating factor // Molecular biotechnology. Totowa, NJ : Humana Press Inc. ISSN 1073-6085. eISSN 1559-0305. 2017, Vol. 59, Iss. 9-10, p. 374-384. DOI: 10.1007/s12033-017-0026-7. [DB: Biological Abstracts, Academic OneFile, Embase, INSPEC, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 1.815; AIF: 3.921; Q3 (2017 InCities JCR SCIE)]
3 Dubakienė, Rūta; Rubinaitė, Vilija; Petronytė, Malvina; Dalgėdienė, Indrė; Rudzevičienė, Odilija; Dubakaitė, Dalia Marija; Rudalevičienė, Palmira; Žvirblienė, Aurelija. Investigation of markers of allergic sensitization and viral infections in children with allergy and asthma = Alerginio įsijautrinimo ir virusinių infekcijų žymenų tyrimai alergija ir astma sergančių vaikų grupėje // Acta medica Lituanica. Vilnius : Lietuvos mokslų akademija. ISSN 1392-0138. eISSN 2029-4174. 2017, T. 24, nr. 3, p. 145-152. DOI: 10.6001/actamedica.v24i3.3548. [DB: Index Copernicus, TOC Premier, Current Abstracts]

2016
1 Lučiūnaitė, Asta; Dalgėdienė, Indrė; Žvirblienė, Aurelija. Activation of macrophage with β-amyloid oligomers and their immune complexes // 8th international conference of Lithuanian neuroscience association : program and abstracts, 9 December, 2016, Vilnius. Vilnius : Lietuvos neuromokslų asociacija, 2016. ISBN 9786094597749. p. 23.
2 Lučiūnaitė, Asta; Dalgėdienė, Indrė; Žvirblienė, Aurelija. Activation of macrophages with oligomeric proteins and their immune complexes // XIVth International Conference of the Lithuanian Biochemical Society : the program and abstract book. Vilnius : Lithuanian Biochemical Society. 2016, p. 10. Prieiga per internetą: <https://cloudup.com/itEl9IF2n8q> [žiūrėta 2018-03-14].

2014
1 Būtienė, Indrė; Dubakienė, Rūta; Būta, Mindaugas; Rudzevičienė, Odilija; Arlauskienė, Audronė; Dalgėdienė, Indrė; Žvirblienė, Aurelija. Motinų ir kūdikių mitybos įtaka alergijai maistui išsivystyti // Vaikų pulmonologija ir alergologija / Lietuvos vaikų pulmonologų draugija. Vilnius : Vilniaus universiteto leidykla. ISSN 1392-5261. 2014, t. 17, nr. 1, p. 5505-5514. [DB: Index Copernicus]
2 Pamedytytė, Virginija; Dalgėdienė, Indrė. Pelės antikūnų prieš poliomos virusines daleles apibūdinimas ir jų specifiškumo tyrimai // Studentų mokslinė praktika 2014 : konferencijos pranešimų santraukos. D. 2. Vilnius : Lietuvos mokslo taryba, 2014. ISBN 9786094170911. p. 266-268. Prieiga per internetą: <http://studentai.lmt.lt/DOKUMENTAI/KONFERENCIJOS/LMT_knyga-II_d.pdf> [žiūrėta 2014-10-22].
3 Rubinaitė, Vilija; Toleikienė, Justina; Dalgėdienė, Indrė; Dubakienė, Rūta; Žvirblienė, Aurelija. Analysis of atopy-associated genetic markers in the Lithuanian birth cohort // 50th anniversary of FEBS : Abstracts book of The XIIIth International Conference of Lithuanian Biochemical Society, June 18-20, 2014. Birštonas. 2014, p. 58. Prieiga per internetą: <http://www.elib.grsu.by/katalog/481236pdf.pdf?d=true> [žiūrėta 2016-06-08].
4 Dalgėdienė, Indrė; Lasickienė, Rita; Budvytytė, Rima; Lučiūnaitė, Asta; Morkūnienė, Ramunė; Borutaitė, Vilmantė; Valinčius, Gintaras; Žvirblienė, Aurelija. The immunogenicity of amyloid beta oligomers and their role in macrophage-mediated inflammation // 50th anniversary of FEBS : Abstracts book of The XIIIth International Conference of Lithuanian Biochemical Society, June 18-20, 2014. Vilnius. 2014, p. 19. Prieiga per internetą: <http://www.elib.grsu.by/katalog/481236pdf.pdf?d=true> [žiūrėta 2016-05-16].
5 Lučiūnaitė, Asta; Dalgėdienė, Indrė; Žvirblienė, Aurelija. Model system for research of the influence of oligomeric proteins and their immune complexes on the phenotype of macrophages // 50th anniversary of FEBS : Abstracts book of The XIIIth International Conference of Lithuanian Biochemical Society, June 18-20, 2014. Vilnius. 2014, p. 25. Prieiga per internetą: <http://www.elib.grsu.by/katalog/481236pdf.pdf?d=true> [žiūrėta 2016-05-16].
6 Lazutka, Justas; Žvirblienė, Aurelija; Dalgėdienė, Indrė; Petraitytė-Burneikienė, Rasa; Špakova, Aliona; Sereika, Vilimas; Lelešius, Raimundas; Wernike, Kerstin; Beer, Martin; Sasnauskas, Kęstutis. Generation of recombinant schmallenberg virus nucleocapsid protein in yeast and development of virus-specific monoclonal antibodies // Journal of immunology research. New York : Hindawi Publishing Corporation. ISSN 2314-8861. 2014, vol. 2014, p. 1-8. DOI: 10.1155/2014/160316. [DB: Science Citation Index Expanded (Web of Science)]
7 Morkūnienė, Ramunė; Jankevičiūtė, Silvija; Čižas, Paulius; Dalgedienė, Indrė; Žvirblienė, Aurelija; Borutaitė, Vilmantė. Immune complexes of antibodies with Aβ oligomers cause neuronal death in primary neuronal-glial culture by activating microglia // XIIIth International Conference of Lithuanian Biochemical Society "50th anniversary of FEBS" : June 18-20, 2014 ; Symposium "Young biochemistry" : June 17, 2014, Birštonas, Lithuania : Abstracts book of The XIIIth International Conference of Lithuanian Biochemical Society / Organizers: Lietuvos biochemikų draugija / Lithuanian Biochemical Society. Birštonas : Lietuvos biochemikų draugija. 2014, p. 24-25, no. P.P.6.
8 Dalgedienė, Indrė; Lasickienė, Rita; Budvytytė, Rima; Morkūnienė, Ramunė; Borutaitė, Vilmantė; Valinčius, Gintaras; Žvirblienė, Aurelija. Studies on the immunogenicity of amyloid beta oligomers and their role in macrophagemediated inflammation // The FEBS journal : Special Issue: FEBS EMBO 2014 Conference : Paris, France, 30 August-4 September 2014 : abstract book / Federation of European Biochemical Societies ; Edited by: Richard Perham. Oxford, UK : Published by Blackwell Pub. ISSN 1742-464X. 2014, vol. 281, suppl. 1, September, p. 171, no. SUN-310. DOI: 10.1111/febs.12919. [DB: Chemical abstracts, Index Medicus, Current Awareness in Biological Sciences, AgBiotech News and Information, Science Citation Index Expanded (Web of Science), MEDLINE] [IF: 4.001; AIF: 4.149; Q2 (2014 InCities JCR SCIE)]

2013
1 Dalgėdienė, Indrė; Kučinskaitė-Kodzė, Indrė; Slibinskas, Rimantas; Juozapaitis, Mindaugas; Sasnauskas, Kęstutis; Žvirblienė, Aurelija. Nucleocapsid proteins of human paramyxoviruses: antigenic similarities and differences // The FEBS Journal. Oxford : Wiley-Blackwell Publishing Ltd. ISSN 1742-464X. 2013, vol. 280, suppl. 1, p. 474. Prieiga per internetą: <http://onlinelibrary.wiley.com/doi/10.1111/febs.12340/pdf> [žiūrėta 2013-11-06]. [DB: Chemical abstracts, Index Medicus, Current Awareness in Biological Sciences, AgBiotech News and Information, Science Citation Index Expanded (Web of Science)] [IF: 3.986; AIF: 4.311; Q2 (2013 InCities JCR SCIE)]
2 Dalgėdienė, Indrė; Lasickienė, Rita; Morkūnienė, Ramunė; Borutaitė, Vilmantė; Žvirblienė, Aurelija. Lėtinio uždegimo, pasireiškiančio sergant Alzheimerio liga, imunologinių mechanizmų tyrimai // Bioateitis: gamtos ir gyvybės mokslų perspektyvos : 2013 m. jaunųjų mokslininkų konferencijos pranešimų santraukos. Vilnius : LMA leidykla. 2013, p. 10.
3 Morkūnienė, Ramunė; Žvirblienė, Aurelija; Dalgėdienė, Indrė; Čižas, Paulius; Jankevičiūtė, Silvija; Baliulytė, Giedrė; Jokubka, Ramūnas; Jankunec, Marija; Valinčius, Gintaras; Borutaitė, Vilmantė. Antibodies bound to Aβ oligomers potentiate the neurotoxicity of Aβ by activating microglia // Journal of neurochemistry. Chichester : Wiley-Blackwell Publishing Ltd. ISSN 0022-3042. 2013, vol. 126, no 5, p. 604-605. DOI: 10.1111/jnc.12332. [DB: Embase, BIOSIS Previews, Biological Abstracts, Academic Search Premier, MEDLINE, Scopus, IBZ - Internationale Bibliographie der Geistes- und Sozialwissenschaftlichen Zeitschriftenliteratur, Chemical abstracts, PubMed, Science Citation Index Expanded (Web of Science)] [IF: 4.244; AIF: 4.187; Q1 (2013 InCities JCR SCIE)]
4 Dalgėdienė, Indrė; Lasickienė, Rita; Budvytytė, Rima; Valinčius, Gintaras; Morkūnienė, Ramunė; Borutaitė, Vilmantė; Žvirblienė, Aurelija. Immunogenic properties of amyloid beta oligomers // Journal of biomedical science. London : BioMed Central Ltd. ISSN 1021-7770. eISSN 1423-0127. 2013, vol. 20, Art. No. 10. DOI: 10.1186/1423-0127-20-10. [DB: Science Citation Index Expanded (Web of Science), MEDLINE, AIDSLINE, Life Sciences Collection] [IF: 2.736; AIF: 3.394; Q2 (2013 InCities JCR SCIE)]

2012
1 Lasickienė, Rita; Gedvilaitė, Alma; Norkienė, Milda; Simanavičienė, Vaida; Šėžaitė, Indrė; Dekaminavičiūtė, Dovilė; Shikova, Evelina; Žvirblienė, Aurelija. The use of recombinant pseudotype virus-like particles harbouring inserted target antigen to generate antibodies against cellular marker p16INK4A // The Scientific World Journal. New York : Hindawi Publishing Corporation. ISSN 1537-744X. 2012, Vol. 2012, Art. No. 263737. DOI: 10.1100/2012/263737. [DB: Science Citation Index Expanded (Web of Science), Scopus, MEDLINE, PubMed, Embase] [IF: 1.730; AIF: 6.803; Q1 (2012 InCities JCR SCIE)]
2 Dubakienė, Rūta; Rudzevičienė, Odilija; Būtienė, Indrė; Šėžaitė, Indrė; Petronytė, Malvina; Vaicekauskaitė, Dalia; Žvirblienė, Aurelija (autorius, išradimo). Studies on early allergic sensitization in the Lithuanian birth cohort // The Scientific World Journal. New York : Hindawi Publishing Corporation. ISSN 1537-744X. 2012, Vol. 2012, Art. No. 909524. DOI: 10.1100/2012/909524. [DB: Science Citation Index Expanded (Web of Science), Scopus, MEDLINE, PubMed, Embase] [IF: 1.730; AIF: 6.803; Q1 (2012 InCities JCR SCIE)]

2011
1 Plečkaitytė, Milda; Žvirblienė, Aurelija; Šėžaitė, Indrė; Gedvilaitė, Alma. Production in yeast of pseudotype virus-like particles harboring functionally active antibody fragments neutralizing the cytolytic activity of vaginolysin // Microbial cell factories. London : BioMed Central Ltd. ISSN 1475-2859. 2011, Vol. 10, Art. No. 109. DOI: 10.1186/1475-2859-10-109. [DB: Current Abstracts, Science Citation Index Expanded (Web of Science), MEDLINE, Scopus, TOC Premier, Embase] [IF: 3.552; AIF: 3.255; Q1 (2011 InCities JCR SCIE)]