VU Gyvybės mokslų centro autoriaus 'Mindaugas Margelevičius' publikacijų sąrašas

2024
1 Margelevičius, Mindaugas. GTalign: spatial index-driven protein structure alignment, superposition, and search // Nature communications. Berlin : Springer Nature. eISSN 2041-1723. 2024, vol. 15, iss. 1, art. no. 7305, p. [1-14]. DOI: 10.1038/s41467-024-51669-z. [DB: Science Citation Index Expanded (Web of Science), Scopus]

2023
1 Dapkūnas, Justas; Margelevičius, Mindaugas. The COMER web server for protein analysis by homology // Bioinformatics. Oxford : Oxford University Press. ISSN 1367-4803. eISSN 1460-2059. 2023, vol. 39, no. 1, art. no. btac807, p. [1-3]. DOI: 10.1093/bioinformatics/btac807. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 4.400; AIF: 4.066; Q1 (2023 InCities JCR SCIE)]

2020
1 Margelevičius, Mindaugas. COMER2: GPU-accelerated sensitive and specific homology searches // Bioinformatics. Oxford : Oxford university press. ISSN 1367-4803. eISSN 1460-2059. 2020, vol. 36, iss. 11, p. 3570-3572. DOI: 10.1093/bioinformatics/btaa185. [DB: Scopus, Science Citation Index Expanded (Web of Science)] [IF: 6.937; AIF: 4.300; Q1 (2020 InCities JCR SCIE)]

2019
1 Margelevičius, Mindaugas. Estimating statistical significance of local protein profile-profile alignments // BMC bioinformatics. London : BioMed Central Ltd. eISSN 1471-2105. 2019, vol. 20, iss. 1, art. no. 419, p. [1-13]. DOI: 10.1186/s12859-019-2913-3. [DB: BIOSIS Previews, MEDLINE, Scopus, Science Citation Index Expanded (Web of Science)]

2018
1 Margelevičius, Mindaugas. A low-complexity add-on score for protein remote homology search with COMER // Bioinformatics. Oxford : Oxford University Press. ISSN 1367-4803. eISSN 1460-2059. 2018, vol. 34, no 12, p. 2037-2045. DOI: 10.1093/bioinformatics/bty048. [DB: Scopus, Science Citation Index Expanded (Web of Science)] [IF: 4.531; AIF: 3.260; Q1 (2018 InCities JCR SCIE)]

2017
1 Dapkūnas, Justas; Timinskas, Albertas; Olechnovič, Kliment; Margelevičius, Mindaugas; Dičiūnas, Rytis; Venclovas, Česlovas. The PPI3D web server for searching, analyzing and modeling protein-protein interactions in the context of 3D structures // Bioinformatics. Oxford : Oxford University Press. ISSN 1367-4803. eISSN 1460-2059. 2017, Vol. 33, Iss. 6, p. 935-937. DOI: 10.1093/bioinformatics/btw756. [DB: MEDLINE, Chemical abstracts, BIOSIS Previews, Biological Abstracts, Science Citation Index Expanded (Web of Science)] [IF: 5.481; AIF: 3.141; Q1 (2017 InCities JCR SCIE)]

2016
1 Margelevičius, Mindaugas. Bayesian nonparametrics in protein remote homology search // Bioinformatics. Oxford : Oxford University Press. ISSN 1367-4803. eISSN 1460-2059. 2016, Vol. 32, Iss. 18, p. 2744-2752. DOI: 10.1093/bioinformatics/btw213. [DB: Biological Abstracts, BIOSIS Previews, Chemical abstracts, MEDLINE, Science Citation Index Expanded (Web of Science)] [IF: 7.307; AIF: 3.258; Q1 (2016 InCities JCR SCIE)]

2014
1 Dapkūnas, Justas; Timinskas, Albertas; Olechnovič, Kliment; Margelevičius, Mindaugas; Dičiūnas, Rytis; Venclovas, Česlovas. The PPI3D web server for searching, analyzing and modeling protein-protein interactions in the context of 3D structures // 50th anniversary of FEBS : Abstracts book of The XIIIth International Conference of Lithuanian Biochemical Society, June 18-20, 2014. Vilnius. 2014, p. 17. Prieiga per internetą: <http://www.elib.grsu.by/katalog/481236pdf.pdf?d=true> [žiūrėta 2016-05-16].

2011
1 Laganeckas, Mindaugas; Margelevičius, Mindaugas; Venclovas, Česlovas. Identification of new homologs of PD-(D/E)XK nucleases by support vector machines trained on data derived from profile–profile alignments // Nucleic acids research. Oxford : Oxford University Press. ISSN 0305-1048. 2011, vol. 39, no. 4, p. 1187-1196. DOI: 10.1093/nar/gkq958. [DB: Biological Abstracts, BIOSIS Previews, Current Contents / Life Sciences, MEDLINE, Science Citation Index Expanded (Web of Science)] [IF: 8.026; AIF: 4.273; Q1 (2011 InCities JCR SCIE)]
2 Olechnovič, Kliment; Margelevičius, Mindaugas; Venclovas, Česlovas. Voroprot: an interactive tool for the analysis and visualization of complex geometric features of protein structure // Bioinformatics. Oxford : Oxford University Press. ISSN 1367-4803. 2011, Vol. 27, no. 5, p. 723-724. DOI: 10.1093/bioinformatics/btq720. [DB: Embase, Biological Abstracts, MEDLINE, Current Contents / Life Sciences, Chemical abstracts, CAB Abstracts, BIOSIS Previews, Science Citation Index Expanded (Web of Science)] [IF: 5.468; AIF: 3.196; Q1 (2011 InCities JCR SCIE)]