VU Gyvybės mokslų centro autoriaus 'Miglė Tomkuvienė' publikacijų sąrašas

2024
1 Kriukienė, Edita; Tomkuvienė, Miglė; Klimašauskas, Saulius. 5-Hydroxymethylcytosine: the many faces of the sixth base of mammalian DNA // Chemical Society Reviews. Cambridge : Royal Society of Chemistry. ISSN 0306-0012. eISSN 1460-4744. 2024, vol. 53, iss. 5, p. 2264-2283. DOI: 10.1039/d3cs00858d. [DB: Science Citation Index Expanded (Web of Science), Scopus]
2 Dapkūnas, Justas; Timinskas, Albertas; Olechnovič, Kliment; Tomkuvienė, Miglė; Venclovas, Česlovas. PPI3D: a web server for searching, analyzing and modeling protein-protein, protein-peptide and protein-nucleic acid interactions // Nucleic acids research. Oxford : Oxford University Press. ISSN 0305-1048. eISSN 1362-4962. 2024, vol. 52, iss. W1, art. no. gkae278, p. W264-W271. DOI: 10.1093/nar/gkae278. [DB: Science Citation Index Expanded (Web of Science)]
3 Žebrauskienė, Dovilė; Sadauskienė, Eglė; Dapkūnas, Justas; Kairys, Visvaldas; Balčiūnas, Joris; Konovalovas, Aleksandras; Masiulienė, Rūta; Petraitytė, Gunda; Valevičienė, Nomeda Rima; Matačiūnas, Mindaugas; Barysienė, Jūratė; Mikštienė, Violeta; Tomkuvienė, Miglė; Preikšaitienė, Eglė. Aortic disease and cardiomyopathy in patients with a novel DNMT3A gene variant causing Tatton-Brown–Rahman syndrome // Clinical epigenetics. London : BioMed Central Ltd. ISSN 1868-7075. eISSN 1868-7083. 2024, vol. 16, iss. 1, art. no. 76, p. [1-15]. DOI: 10.1186/s13148-024-01686-y. [DB: Science Citation Index Expanded (Web of Science), Scopus]

2022
1 Tomkuvienė, Miglė; Meier, Markus; Ikasalaitė, Diana; Wildenauer, Julia; Kairys, Visvaldas; Klimašauskas, Saulius; Manelytė, Laura. Enhanced nucleosome assembly at CpG sites containing an extended 5-methylcytosine analogue // Nucleic acids research. Oxford : Oxford University Press. ISSN 0305-1048. eISSN 1362-4962. 2022, vol. 50, iss. 11, p. 6549-6561. DOI: 10.1093/nar/gkac444. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 14.900; AIF: 5.900; Q1 (2022 InCities JCR SCIE)]
2 Tomkuvienė, Miglė; Kriukienė, Edita; Klimašauskas, Saulius. DNA labeling using DNA methyltransferases // DNA methyltransferases - role and function / editors Albert Jeltsch, Renata Z.Jurkowska. Cham : Springer, 2022, chapter 19. ISBN 9783031114533. eISBN 9783031114540. p. 535-562. (Advances in experimental medicine and biology, ISSN 0065-2598, eISSN 2214-8019 ; vol. 1389). DOI: 10.1007/978-3-031-11454-0_19. [DB: Book Citation Index - Science (Web of Science), Scopus, SpringerLink]

2021
1 Tesfahun, Almaz Nigatu; Alexeeva, Marina; Tomkuvienė, Miglė; Arshad, Aysha; Guragain, Prashanna; Klungland, Arne; Klimašauskas, Saulius; Ruoff, Peter; Bjelland, Svein. Alleviation of C⋅C mismatches in DNA by the Escherichia coli Fpg protein // Frontiers in microbiology. Lausanne : Frontiers media SA. eISSN 1664-302X. 2021, vol. 12, art. no. 608839, p. [1-10]. DOI: 10.3389/fmicb.2021.608839. [DB: Science Citation Index Expanded (Web of Science), Scopus, PubMed]
2 Dapkūnas, Justas; Timinskas, Albertas; Olechnovič, Kliment; Tomkuvienė, Miglė; Venclovas, Česlovas. PPI3D: a computational resource for searching, analysis and modeling protein-protein, protein-peptide and protein-nucleic acid interactions // Protein science: Award Winners and Abstracts of the 35th Anniversary Symposium of The Protein Society, July 7–14, 2021 | Virtual. Hoboken : Wiley. ISSN 0961-8368. eISSN 1469-896X. 2021, vol. 30, suppl. 1, art. no. 507, p. 189. DOI: 10.1002/pro.4191. [DB: Science Citation Index Expanded (Web of Science)] [IF: 6.993; AIF: 6.490; Q1 (2021 InCities JCR SCIE)]

2020
1 Tomkuvienė, Miglė; Ikasalaitė, Diana; Slyvka, Anton; Rukšėnaitė, Audronė; Ravichandran, Mirunalini; Jurkowski, Tomasz P; Bochtler, Matthias; Klimašauskas, Saulius. Enzymatic hydroxylation and excision of extended 5-methylcytosine analogues // Journal of molecular biology. London : Academic Press Ltd. ISSN 0022-2836. eISSN 1089-8638. 2020, vol. 432, iss. 23, p. 6157-6167. DOI: 10.1016/j.jmb.2020.10.011. [DB: Science Citation Index Expanded (Web of Science), Scopus, MEDLINE, Academic Search Premier] [IF: 5.469; AIF: 5.817; Q2 (2020 InCities JCR SCIE)]

2019
1 Tomkuvienė, Miglė; Mickutė, Milda; Vilkaitis, Giedrius; Klimašauskas, Saulius. Repurposing enzymatic transferase reactions for targeted labeling and analysis of DNA and RNA // Current opinion in biotechnology. London : Elsevier BV. ISSN 0958-1669. eISSN 1879-0429. 2019, vol. 55, p. 114-123. DOI: 10.1016/j.copbio.2018.09.008. [DB: MEDLINE, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 8.288; AIF: 3.846; Q1 (2019 InCities JCR SCIE)]

2018
1 Tomkuvienė, Miglė; Ličytė, Janina; Olendraitė, Ingrida; Liutkevičiūtė, Zita; Clouet-d'Orval, Béatrice; Klimašauskas, Saulius. Archaeal fibrillarin-Nop5 heterodimer 2'-O-methylates RNA independently of hte C/D guide RNP particle // Vita Scientia : international conference, 3rd January 2018, Vilnius : conference book. Vilnius : Vita Scientia. ISSN 2538-791X. 2018, p. 35. Prieiga per internetą: <http://www.vitascientia.lt/book> [žiūrėta 2018-04-27].
2 Valančauskas, Lukas; Tomkuvienė, Miglė; Klimašauskas, Saulius. Enzymatic synthesis of AdoMet analogues // 15th International conference of the Lithuanian Biochemical Society, Dubingiai, June 26-29, 2018 : programme and abstract book. [Vilnius] : Lietuvos biochemikų draugija, 2018. ISBN 9786099603001. p. 42. Prieiga per internetą: <http://www.biochemistry.lt/xv-lbd-konferencija/pranesimu-santraukos/> [žiūrėta 2018-10-17].
3 Ikasalaitė, Diana; Tomkuvienė, Miglė; Slyvka, Anton; Bochtler, Matthias; Klimašauskas, Saulius. DNA N-glycosylase and TET activity with 5-alkylcytosines // 15th International conference of the Lithuanian Biochemical Society, Dubingiai, June 26-29, 2018 : programme and abstract book. [Vilnius] : Lietuvos biochemikų draugija, 2018. ISBN 9786099603001. p. 42. Prieiga per internetą: <http://www.biochemistry.lt/xv-lbd-konferencija/pranesimu-santraukos/> [žiūrėta 2018-10-17].
4 Tomkuvienė, Miglė; Alexeeva, Marina; Tesfahun, Almaz N.; Guragain, Prashanna; Gerasimaitė, Rūta; Klungland, Arne; Klimašauskas, Saulius; Bjelland, Svein. A doubly methylated base N4,5-dimethylcytosine in DNA and its repair // 15th International conference of the Lithuanian Biochemical Society, Dubingiai, June 26-29, 2018 : programme and abstract book. [Vilnius] : Lietuvos biochemikų draugija, 2018. ISBN 9786099603001. p. 79. Prieiga per internetą: <http://www.biochemistry.lt/xv-lbd-konferencija/pranesimu-santraukos/> [žiūrėta 2018-11-07].
5 Alexeeva, Marina; Guragain, Prashanna; Tesfahun, Almaz N.; Tomkuvienė, Miglė; Arshad, Aysha; Gerasimaitė, Rūta; Rukšėnaitė, Audronė; Urbanavičiūtė, Giedrė; Bjørås, Magnar; Laerdahl, Jon K.; Klungland, Arne; Klimašauskas, Saulius; Bjelland, Svein. Excision of the doubly methylated base N4,5-dimethylcytosine from DNA by Escherichia coli Nei and Fpg proteins // Philosophical transactions of the royal society. B-biological sciences. London : Royal Society. ISSN 0962-8436. eISSN 1471-2970. 2018, vol. 373, no 1748, art. no 20170337, p. 62-68. DOI: 10.1098/rstb.2017.0337. [DB: Scopus, Science Citation Index Expanded (Web of Science)] [IF: 6.139; AIF: 3.181; Q1 (2018 InCities JCR SCIE)]

2017
1 Tomkuvienė, Miglė; Ličytė, Janina; Olendraitė, Ingrida; Liutkevičiūtė, Zita; Clouet-D'Orval, Béatrice; Klimašauskas, Saulius. Archaeal fibrillarin-Nop5 heterodimer 2 '-O-methylates RNA independently of the C/D guide RNP particle // RNA. Cold Spring Harbor, NY : Cold Spring Harbor Laboratory Press. ISSN 1355-8382. eISSN 1469-9001. 2017, Vol. 23, Iss. 9, p. 1329-1337. DOI: 10.1261/rna.059832.116. [DB: CABI Abstracts Databases, BIOSIS Previews, MEDLINE, Embase, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 4.490; AIF: 4.281; Q1 (2017 InCities JCR SCIE)]
2 Tomkuvienė, Miglė; Ličytė, Janina; Olendraitė, Ingrida; Clouet-d’Orval, Béatrice; Klimašauskas, Saulius. Archėjų RNR metiltransferazinio C/D RNP komplekso tyrimai ir taikymai // Bioateitis: gamtos ir gyvybės mokslų perspektyvos : 10-oji jaunųjų mokslininkų konferencija, 2017 m. gruodžio 7 d.: pranešimų santraukos. Vilnius : Lietuvos mokslų akademijos leidykla. 2017, p. 20-21. Prieiga per internetą: <http://www.lma.lt/uploads/2017-12-07_BIOATEITIS_pranesimu_santraukos.pdf> [žiūrėta 2018-03-27].

2016
1 Tomkuvienė, Miglė; Kriukienė, Edita; Klimašauskas, Saulius. DNA labeling using DNA methyltransferases // DNA methyltransferases - role and function / Editors: Jeltsch, Albert, Jurkowska, Renata Z. - Series : Advances in experimental medicine and biology. Vol. 945. Cham : Springer, 2016. ISBN 9783319436227. eISBN 9783319436241. p. 511-535. DOI: 10.1007/978-3-319-43624-1_19. [DB: SpringerLink]
2 Tomkuvienė, Miglė; Ličytė, Janina; Olendraitė, Ingrida; Liutkevičiūtė, Zita; Clouet-d'Orval, Béatrice; Klimašauskas, Saulius. “Unguided” site-specific methylation of 16S rRNA by an archaeal protein aFib-Nop5p heterodimer // XIVth International Conference of the Lithuanian Biochemical Society : the program and abstract book. Vilnius : Lithuanian Biochemical Society. 2016, p. 97-98. Prieiga per internetą: <https://cloudup.com/itEl9IF2n8q> [žiūrėta 2018-03-19].

2014
1 Ličytė, Janina; Tomkuvienė, Miglė; Olendraitė, Ingrida; Clouet-d'Orval, Beatrice; Klimašauskas, Saulius. Archaeal protein aFib and Nop5p heterodimer methylates 16S rRNA site-specifically, independently of C/D guide RNA // 50th anniversary of FEBS : Abstracts book of The XIIIth International Conference of Lithuanian Biochemical Society, June 18-20, 2014. Vilnius. 2014, p. 15. Prieiga per internetą: <http://www.elib.grsu.by/katalog/481236pdf.pdf?d=true> [žiūrėta 2016-05-16].
2 Ličytė, Janina; Tomkuvienė, Miglė; Clouet-d'Orval, Beatrice; Klimašauskas, Saulius. Archaeal protein aFib and Nop5p heterodimer methylates 16S rRNA site-specifically, independently of C/D guide RNA // The FEBS journal. Oxford : Wiley-Blackwell Publishing Ltd. ISSN 1742-464X. 2014, Vol. 281, suppl. 1, p. 676. DOI: 10.1111/febs.12919. [DB: Chemical abstracts, Index Medicus, Current Awareness in Biological Sciences, AgBiotech News and Information, Science Citation Index Expanded (Web of Science)] [IF: 4.001; AIF: 4.149; Q2 (2014 InCities JCR SCIE)]

2013
1 Lukinavičius, Gražvydas; Tomkuvienė, Miglė; Masevičius, Viktoras; Klimašauskas, Saulius. Enhanced chemical stability of AdoMet analogues for improved methyltransferase-directed labeling of DNA // ACS chemical biology. Washington : American Chemical Society. ISSN 1554-8929. 2013, vol. 8, iss. 6, p. 1134-1139. DOI: 10.1021/cb300669x. [DB: Embase, Scopus, Chemical abstracts, PubMed, Science Citation Index Expanded (Web of Science)] [IF: 5.356; AIF: 4.311; Q1 (2013 InCities JCR SCIE)]

2012
1 Tomkuvienė, Miglė; Clouet-d'Orval, Beatrice; Černiauskas, Ignas; Weinhold, Elmar; Klimašauskas, Saulius. Programuojamas sekai specifinis RNR modifikavimas ir žymėjimas panaudojant archėjų C/D RNP kompleksus // Fizinių ir technologijos mokslų tarpdalykiniai tyrimai : antroji LMA Jaunųjų mokslininkų konferencija, Vilnius, 2012 02 14. Fizinių mokslų sekcija : pranešimų tezės. Vilnius : LMA leidykla. 2012, [1 p.].
2 Tomkuvienė, Miglė; Clouet-d'Orval, Beatrice; Černiauskas, Ignas; Weinhold, Elmar; Klimašauskas, Saulius. Programmable sequence-specific click-labeling of RNA using archaeal box C/D RNP methyltransferases // Nucleic acids research. Oxford : Oxford University Press. ISSN 0305-1048. 2012, Vol. 40, no. 14, p. 6765-6773. DOI: 10.1093/nar/gks381. [DB: Scopus, Science Citation Index Expanded (Web of Science), CAB Abstracts, MEDLINE, VINITI] [IF: 8.278; AIF: 4.273; Q1 (2012 InCities JCR SCIE)]