VU Gyvybės mokslų centro autoriaus 'Giedrius Gasiūnas' publikacijų sąrašas

2024
1 Pudžiuvelytė, Ieva; Olechnovič, Kliment; Godliauskaitė, Eglė; Šermokas, Kristupas; Urbaitis, Tomas; Gasiūnas, Giedrius; Kazlauskas, Darius. TemStaPro: protein thermostability prediction using sequence representations from protein language models // Bioinformatics. Oxford : Oxford University Press. ISSN 1367-4803. eISSN 1367-4811. 2024, vol. 40, iss. 4, art. no. btae157, p. [1-8]. DOI: 10.1093/bioinformatics/btae157. [DB: Science Citation Index Expanded (Web of Science), Scopus]

2023
1 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Zaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. US11555187B2. 2023-01-17. 83 p. Prieiga per internetą: <https://patents.google.com/patent/US11555187B2/en?oq=US11555187B2>.
2 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. US20230123754A1. 2023-04-20. 42 p. Prieiga per internetą: <https://patents.google.com/patent/US20230123754A1/en?oq=US20230123754A1>.
3 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. US20230272394A1. 2023-08-31. 61 p. Prieiga per internetą: <https://patents.google.com/patent/US20230272394A1/en?oq=US20230272394A1>.

2022
1 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Zaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). RNA-directed DNA cleavage by Cas9-crRNA complex. JP7113877B2. 2022-08-05. 37 p. Prieiga per internetą: <https://patents.google.com/patent/JP7113877B2/>.
2 Uludağ, Hasan; Aliabadi, Hamidreza Montazeri; Gasiūnas, Giedrius. Editorial: Current approaches to CRISPR/Cas9 delivery // Frontiers in bioengineering and biotechnology. Lausanne : Frontiers Media SA. ISSN 2296-4185. 2022, vol. 10, art. no. 1103007, p. [1-2]. DOI: 10.3389/fbioe.2022.1103007. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 5.700; AIF: 7.200; Q1 (2022 InCities JCR SCIE)]
3 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Zaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. JP7186574B2. 2022-12-09. 38 p. Prieiga per internetą: <https://patents.google.com/patent/JP7186574B2/en?oq=JP6423338B2>.

2021
1 Balderston, Sarah; Taulbee, Jeffrey J; Celaya, Elizabeth; Fung, Kandace; Jiao, Amanda; Smith, Kasey; Hajian, Reza; Gasiūnas, Giedrius; Kutanovas, Simonas; Kim, Daehwan; Parkinson, Jonathan; Dickerson, Kenneth; Ripoll, Juan-José; Peytavi, Regis; Lu, Hsiang-Wei; Barron, Francie; Goldsmith, Brett R; Collins, Philip G; Conboy, Irina M; Šikšnys, Virginijus; Aran, Kiana. Discrimination of single-point mutations in unamplified genomic DNA via Cas9 immobilized on a graphene field-effect transistor // Nature biomedical engineering. Berlin : Nature research. eISSN 2157-846X. 2021, vol. 5, iss. 7, p. 713-725. DOI: 10.1038/s41551-021-00706-z. [DB: Science Citation Index Expanded (Web of Science), Scopus, PubMed]
2 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Žaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. JP2021019617A. 2021-02-18. 36 p.

2020
1 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Žaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). RNA-directed DNA cleavage by the CAS9-CRRNA complex : European patent application. EP3594341A1. 2020-01-15. 79 p. [DB: Espacenet]
2 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. CN104520429B. 2020-01-15. Prieiga per internetą: <https://worldwide.espacenet.com/patent/search/family/048050947/publication/CN104520429B?q=pn%3DCN104520429B>. [DB: Espacenet]
3 Mullally, Grace; van Aelst, Kara; Naqvi, Mohsin M; Diffin, Fiona M; Karvelis, Tautvydas; Gasiūnas, Giedrius; Šikšnys, Virginijus; Szczelkun, Mark D. 5' modifications to CRISPR-Cas9 gRNA can change the dynamics and size of R-loops and inhibit DNA cleavage // Nucleic acids research. Oxford : Oxford University Press. ISSN 0305-1048. eISSN 1362-4962. 2020, vol. 48, iss. 12, p. 6811-6823. DOI: 10.1093/nar/gkaa477. [DB: Current Contents, BIOSIS Previews, PubMed, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 16.971; AIF: 5.817; Q1 (2020 InCities JCR SCIE)]
4 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. US10844378B2. 2020-11-24. 57 p.

2019
1 Šulčius, Sigitas; Šimoliūnas, Eugenijus; Alzbutas, Gediminas; Gasiūnas, Giedrius; Jauniškis, Vykintas; Kuznecova, Jolita; Miettinen, Sini; Nilsson, Emelie; Meškys, Rolandas; Roine, Elina; Paškauskas, Ričardas; Holmfeldt, Karin. Genomic characterization of cyanophage vB_AphaS-CL131 infecting filamentous diazotrophic cyanobacterium aphanizomenon flos-aquae reveals novel insights into virus-bacterium interactions // Applied and environmental microbiology. Washington : American Society for Microbiology. ISSN 0099-2240. eISSN 1098-5336. 2019, vol. 85, no 1, e01311-18, p. 1-48. DOI: 10.1128/AEM.01311-18. [DB: Biotechnology Research Abstracts, Scopus, Science Citation Index Expanded (Web of Science)] [IF: 4.016; AIF: 4.128; Q1 (2019 InCities JCR SCIE)]
2 Wilkinson, Martin; Drabavičius, Gediminas; Šilanskas, Arūnas; Gasiūnas, Giedrius; Šikšnys, Virginijus; Wigley, Dale B. Structure of the DNA-bound spacer capture complex of a type II CRISPR-Cas system // Molecular cell. Cambridge, MA : Cell Press. ISSN 1097-2765. eISSN 1097-4164. 2019, vol. 75, iss. 1, p. 90-101. DOI: 10.1016/j.molcel.2019.04.020. [DB: MEDLINE, Embase, BIOSIS Previews, ScienceDirect, Science Citation Index Expanded (Web of Science), Scopus] [IF: 15.584; AIF: 5.487; Q1 (2019 InCities JCR SCIE)]
3 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Žaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. EP2828386B1. 2019-07-10. 105 p. Prieiga per internetą: <https://patents.google.com/patent/EP2828386B1/en> [žiūrėta 2019-11-28].
4 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. US20190085329A1. 2019-03-21. 56 p. Prieiga per internetą: <https://patents.google.com/patent/US20190085329A1/en?oq=US20190085329A1>.
5 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Žaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). Cas9-crRNA RNA-directed DNA cleavage by complexes. JP2019030321A. 2019-02-28. 37 p. Prieiga per internetą: <https://patents.google.com/patent/JP2019030321A/en?oq=JP6423338B2> [žiūrėta 2019-11-28].

2018
1 Bigelytė, Greta; Karvelis, Tautvydas; Gasiūnas, Giedrius; Young, Joshua K.; Šilanskas, Arūnas; Cigan, Mark; Šikšnys, Virginijus. A rapid method for the identification of protospacer adjacent motifs and guide RNAs for novel Cas9 orthologs // Vita Scientia : international conference, 3rd January 2018, Vilnius : conference book. Vilnius : Vita Scientia. ISSN 2538-791X. 2018, p. 27. Prieiga per internetą: <http://www.vitascientia.lt/book> [žiūrėta 2018-04-19].
2 Drabavičius, Gediminas; Šilanskas, Arūnas; Šinkūnas, Tomas; Gasiūnas, Giedrius. Proofreading domain facilitates spacer integration in CRISPR-Cas - an adaptive prokaryotic immunity // Vita Scientia : international conference, 3rd January 2018, Vilnius : conference book. Vilnius : Vita Scientia. ISSN 2538-791X. 2018, p. 56-57. Prieiga per internetą: <http://www.vitascientia.lt/book> [žiūrėta 2018-04-27].
3 Budvydytė, Goda; Burokas, Vytenis; Černiauskaitė, Neringa; Gapševičius, Mindaugas; Gasiūnas, Giedrius; Jatautas, Marius; Michelkevičius, Vytautas; Rybakova, Viktorija; Sabolius, Kristupas; Tautvaišas, Dainius; Urbonienė, Nomeda; Urbonas, Gediminas; Sabolius, Kristupas (sudarytojas). Materija ir vaizduotė. Hibridinė kūryba tarp meno ir mokslo. Vilnius : Vilniaus universiteto leidykla, 2018. 232 psl. ISBN 9786090700372.
4 Drabavičius, Gediminas; Šinkūnas, Tomas; Šilanskas, Arūnas; Gasiūnas, Giedrius; Venclovas, Česlovas; Šikšnys, Virginijus. DnaQ exonuclease-like domain of Cas2 promotes spacer integration in a type I-E CRISPR-Cas system // EMBO reports. Hoboken : Wiley-VCH Verlag. ISSN 1469-221X. eISSN 1469-3178. 2018, vol. 19, no 7, art. no. e45543, p. 1709-1712. DOI: 10.15252/embr.201745543. [DB: Scopus, Science Citation Index Expanded (Web of Science)] [IF: 8.383; AIF: 5.202; Q1 (2018 InCities JCR SCIE)]
5 Driscoll, Connor B.; Meyer, Kevin A.; Šulčius, Sigitas; Brown, Nathan M.; Dick, Gregory J.; Cao, Huansheng; Gasiūnas, Giedrius; Timinskas, Albertas; Yin, Yanbin; Landry, Zachary C.; Otten, Timothy G.; Davis, Timothy W.; Watson, Susan B.; Dreher, Theo W. A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales // Harmful Algae. Amsterdam : Elsevier B.V. ISSN 1568-9883. eISSN 1878-1470. 2018, vol. 77, p. 93-107. DOI: 10.1016/j.hal.2018.05.009. [DB: Scopus, Science Citation Index Expanded (Web of Science)] [IF: 5.012; AIF: 2.325; Q1 (2018 InCities JCR SCIE)]
6 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex. JP6423338B2. 2018-11-14. 49 p. Prieiga per internetą: <https://patents.google.com/patent/JP2015510778A/en?oq=JP6423338B2> [žiūrėta 2019-06-10].
7 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Zaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja. RNA-directed DNA cleavage by the Cas9-crRNA complex. US2018187195. 2018-07-05. 82 p. Prieiga per internetą: <https://worldwide.espacenet.com/publicationDetails/biblio?CC=US&NR=2018187195A1&KC=A1&FT=D&ND=3&date=20180705&DB=EPODOC&locale=en_EP#> [žiūrėta 2019-05-02].

2017
1 Labrie, Viviane; Buske, Orion J; Oh, Edward; Jeremian, Richie; Ptak, Carolyn; Gasiūnas, Giedrius; Maleckas, Almantas; Petereit, Rūta; Šikšnys, Virginijus; Kupčinskas, Limas; Brudno, Michael; Petronis, Artūras. Genetic and epigenetic factors in lactose intolerance: lessons for aging diseases // European neuropsychopharmacology :23rd Annual World Congress of Psychiatric Genetics (WCPG) : Final symposia and plenary abstracts : Toronto, Canada, October 16-20, 2015 / International Society of Psychiatric Genetics. Amsterdam : Elsevier. ISSN 0924-977X. eISSN 1873-7862. 2017, vol. 27, suppl.2, p. S273-S274, no. 31. DOI: 10.1016/j.euroneuro.2015.09.009. [DB: Science Citation Index Expanded (Web of Science)] [IF: 4.129; AIF: 3.556; Q1 (2017 InCities JCR SCIE)]
2 Karvelis, Tautvydas; Gasiūnas, Giedrius; Bigelytė, Greta; Šikšnys, Virginijus. Naujų Cas9 endonukleazių charakterizavimas ir pritaikymas genomo redagavimui // Fizinių ir technologijos mokslų tarpdalykiniai tyrimai : 7-oji jaunųjų mokslininkų konferencija, 2017 m. vasario 9 d. : pranešimų santraukos. Vilnius : Lietuvos mokslų akademijos leidykla. 2017, p. 18-19. Prieiga per internetą: <http://mail.ma.lt/components/com_rseventspro/assets/images/files/2017-02-09_JMK_pranesimu_santraukos_galutines.pdf> [žiūrėta 2017-06-08].
3 Drabavičius, Gediminas; Šilanskas, Arūnas; Šinkūnas, Tomas; Gasiūnas, Giedrius. Proofreading domain facilitates spacer integration in CRISPR-Cas - an adaptive prokaryotic immunity // Open Readings 2017 : 60th International conference for students of physics and natural sciences, March 14-17, 2017, Vilnius, Lithuania : programme and abstracts. Vilnius : Vilniaus universitetas. ISSN 2029-4425. 2017, p. 338. Prieiga per internetą: <http://www.openreadings.eu/wp-content/uploads/2017/03/OR2017_abstracts_book.pdf> [žiūrėta 2017-08-31].
4 Karvelis, Tautvydas; Gasiūnas, Giedrius; Šikšnys, Virginijus. Harnessing the natural diversity and in vitro evolution of Cas9 to expand the genome editing toolbox // Current opinion in microbiology. London : Current biology Ltd. ISSN 1369-5274. eISSN 1879-0364. 2017, Vol. 37, p. 88-94. DOI: 10.1016/j.mib.2017.05.009. [DB: Scopus, MEDLINE, Current Contents, Chemical abstracts, ScienceDirect, Science Citation Index Expanded (Web of Science)] [IF: 6.710; AIF: 3.784; Q1 (2017 InCities JCR SCIE)]
5 Karvelis, Tautvydas; Gasiūnas, Giedrius; Šikšnys, Virginijus. Methods for decoding Cas9 protospacer adjacent motif (PAM) sequences: A brief overview // Methods. San Diego, CA : Academic Press Inc Elsevier science. ISSN 1046-2023. eISSN 1095-9130. 2017, Vol. 121, p. 3-8. DOI: 10.1016/j.ymeth.2017.03.006. [DB: Scopus, ScienceDirect, Embase, Science Citation Index Expanded (Web of Science)] [IF: 3.998; AIF: 3.839; Q1 (2017 InCities JCR SCIE)]
6 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the CAS9-CRRNA complex / Inventors: Virginijus Šikšnys, Giedrius Gasiūnas, Tautvydas Karvelis. US 9637739 B2. 2017-05-02. 30 p. Prieiga per internetą: <http://patft.uspto.gov/netacgi/nph-Parser?Sect1=PTO2&Sect2=HITOFF&p=1&u=%2Fnetahtml%2FPTO%2Fsearch-bool.html&r=17&f=G&l=50&co1=AND&d=PTXT&s1=gasiunas&OS=gasiunas&RS=gasiunas> [žiūrėta 2017-11-23]. [DB: USPTO Patent Full-text and Image Database]
7 Bigelytė, Greta; Šilanskas, Arūnas; Karvelis, Tautvydas; Gasiūnas, Giedrius. Naujų CRISPR-Cas9 baltymų PAM sekos charakterizavimas // Bioateitis: gamtos ir gyvybės mokslų perspektyvos : 10-oji jaunųjų mokslininkų konferencija, 2017 m. gruodžio 7 d.: pranešimų santraukos. Vilnius : Lietuvos mokslų akademijos leidykla. 2017, p. 21. Prieiga per internetą: <http://www.lma.lt/uploads/2017-12-07_BIOATEITIS_pranesimu_santraukos.pdf> [žiūrėta 2018-03-27].

2016
1 Labrie, Viviane; Buske, Orion J; Oh, Edward; Jeremian, Richie; Ptak, Carolyn; Gasiūnas, Giedrius; Maleckas, Almantas; Petereit, Rūta; Žvirblienė, Aida; Adamonis, Kęstutis; Kriukienė, Edita; Koncevičius, Karolis; Gordevičius, Juozas; Nair, Akhil; Zhang, Aiping; Ebrahimi, Sasha; Oh, Gabriel; Šikšnys, Virginijus; Kupčinskas, Limas; Brudno, Michael; Petronis, Artūras. Lactose intolerance is directed by DNA haplotype-dependent epigenetic aging // EPIGENOMICS 2016 - a special International Meeting on Epigenomics and Transcriptional Regulation : January 31-February 5, 2016 Rio Grande, Puerto Rico / International Genetic Epidemiology Society. Puerto Rico : International Genetic Epidemiology Society. 2016, p. 1-1. Prieiga per internetą: <http://epigenomics2016.org/program.html>.
2 Labrie, Viviane; Buske, Orion J; Oh, Edward; Jeremian, Richie; Ptak, Carolyn; Gasiūnas, Giedrius; Maleckas, Almantas; Petereit, Rūta; Žvirblienė, Aida; Adamonis, Kęstutis; Kriukienė, Edita; Koncevičius, Karolis; Gordevičius, Juozas; Nair, Akhil; Zhang, Aiping; Ebrahimi, Sasha; Oh, Gabriel; Šikšnys, Virginijus; Kupčinskas, Limas; Brudno, Michael; Petronis, Arturas. Lactase nonpersistence is directed by DNA-variation-dependent epigenetic aging // Nature structural and molecular biology. New York : Nature Pub. Group. ISSN 1545-9993. 2016, vol. 23, no. 6, p. 566-573. DOI: 10.1038/nsmb.3227. [DB: Scopus, Science Citation Index Expanded (Web of Science), MEDLINE] [IF: 12.595; AIF: 4.393; Q1 (2016 InCities JCR SCIE)]
3 Müller, Maximilian; Lee, Ciaran M; Gasiūnas, Giedrius; Davis, Timothy H; Cradick, Thomas J; Šikšnys, Virginijus; Bao, Gang; Cathomen, Toni; Mussolino, Claudio. Streptococcus thermophilus CRISPR-Cas9 systems enable specific editing of the human genome // Molecular therapy. New York : Nature Publishing Group. ISSN 1525-0016. eISSN 1525-0024. 2016, Vol. 24, Iss. 3, p. 636-644. DOI: 10.1038/mt.2015.218. [DB: Current Contents, MEDLINE, BIOSIS Previews, PubMed, Elsevier Biobase, Scopus, Current Abstracts, Academic Search Premier, Academic Search Complete, Chemical abstracts, Science Citation Index Expanded (Web of Science)] [IF: 6.688; AIF: 3.521; Q1 (2016 InCities JCR SCIE)]
4 Šikšnys, Virginijus; Gasiūnas, Giedrius. Rewiring Cas9 to target new PAM sequences // Molecular cell. Cambridge : Cell Press. ISSN 1097-2765. eISSN 1097-4164. 2016, Vol. 61, p. 793-794. DOI: 10.1016/j.molcel.2016.03.002. [DB: Science Citation Index Expanded (Web of Science), Biological Abstracts, Embase, MEDLINE, AIDS and Cancer Research Abstracts] [IF: 14.714; AIF: 4.950; Q1 (2016 InCities JCR SCIE)]
5 Jakutytė-Giraitienė, Lina; Gasiūnas, Giedrius. Design of a CRISPR‑Cas system to increase resistance of Bacillus subtilis to bacteriophage SPP1 // Journal of industrial microbiology and biotechnology. Heidelberg : Springer. ISSN 1367-5435. eISSN 1476-5535. 2016, Vol. 43, no 8, p. 1183-1188. DOI: 10.1007/s10295-016-1784-0. [DB: Science Citation Index Expanded (Web of Science), Scopus, Biobase, BIOSIS Previews, Biological Abstracts, Chemical abstracts, CABI Abstracts Databases] [IF: 2.810; AIF: 3.515; Q2 (2016 InCities JCR SCIE)]
6 Karvelis, Tautvydas; Gasiūnas, Giedrius; Young, Joshua; Bigelytė, Greta; Šilanskas, Arūnas; Cigan, Mark; Šikšnys, Virginijus. Rapid characterization of CRISPR-Cas9 protospacer adjacent motif (PAM) sequence elements // XIVth International Conference of the Lithuanian Biochemical Society : the program and abstract book. Vilnius : Lithuanian Biochemical Society. 2016, p. 44. Prieiga per internetą: <https://cloudup.com/itEl9IF2n8q> [žiūrėta 2018-03-14].

2015
1 Glemžaitė, Monika; Balčiūnaitė, Eglė; Karvelis, Tautvydas; Gasiūnas, Giedrius; Grušytė, Mantvyda Marija; Alzbutas, Gediminas; Jurcytė, Aistė; Anderson, Emily M.; Maksimova, Elena; Smith, Anja J.; Lubys, Arvydas; Zaliauskienė, Lolita; Šikšnys, Virginijus. Targeted gene editing by transfection of in vitro reconstituted Streptococcus thermophilus Cas9 nuclease complex // RNA biology. Philadelphia : Taylor & Francis Inc. ISSN 1547-6286. eISSN 1555-8584. 2015, vol. 12, no. 1, p. 1-4. DOI: 10.1080/15476286.2015.1017209. [DB: Science Citation Index Expanded (Web of Science), Scopus, MEDLINE] [IF: 4.076; AIF: 4.093; Q2 (2015 InCities JCR SCIE)]
2 Karvelis, Tautvydas; Gasiūnas, Giedrius; Young, Joshua; Bigelytė, Greta; Šilanskas, Arūnas; Cigan, Mark; Šikšnys, Virginijus. Rapid characterization of CRISPR-Cas9 protospacer adjacent motif sequence elements // Genome biology. London : BioMed Central Ltd. ISSN 1465-6906. eISSN 1474-760X. 2015, vol. 16, art. no. 253, p. [1-13]. DOI: 10.1186/s13059-015-0818-7. [DB: Science Citation Index Expanded (Web of Science), BIOSIS Previews, Current Contents, Scopus, MEDLINE, CAB Abstracts] [IF: 11.313; AIF: 3.724; Q1 (2015 InCities JCR SCIE)]
3 Šinkūnas, Tomas; Gasiūnas, Giedrius; Šikšnys, Virginijus. Cas3 nuclease-helicase activity assays // CRISPR: Methods and Protocols / Editors: Lundgren, Magnus, Charpentier, Emmanuelle, Fineran, Peter C. New York : Springer Science+Business Media New York, 2015. ISBN 9781493926862. eISBN 9781493926879. p. 277-291. (Methods in Molecular Biology, ISSN 1064-3745 ; vol. 1311). DOI: 10.1007/978-1-4939-2687-9_18. [DB: SpringerLink]
4 Jeremian, Richie; Labrie, Viviane; Buske, Orion J; Oh, Edward; Ptak, Carolyn; Gasiūnas, Giedrius; Maleckas, Almantas; Petereit, Rūta; Žvirblienė, Aida; Adamonis, Kęstutis; Kriukienė, Edita; Koncevičius, Karolis; Gordevičius, Juozas; Nair, Akhil; Zhang, Aiping; Ebrahimi, Sasha; Oh, Gabriel; Šikšnys, Virginijus; Kupčinskas, Limas; Brudno, Michael; Petronis, Artūras. Genetic and epigenetic factors affecting regulatory elements underlie lactose intolerance and lactase persistence // 65th Annual Meeting of the American Society of Human Genetics - ASHG 2015 : October 6-10, 2015, Baltimore, Maryland : Abstracts / The American Society of Human Genetics. Baltimore : ASHG. 2015, p. 93-93, no. PgmNr 324.

2014
1 Szczelkun, Mark. D.; Tikhomirova, Maria S.; Šinkūnas, Tomas; Gasiūnas, Giedrius; Karvelis, Tautvydas; Pschera, Patrizia; Šikšnys, Virginijus; Seidel, Ralf. Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes // PNAS : Proceedings of the National Academy of Sciences. Washington : National Academy of Sciences. ISSN 0027-8424. 2014, vol.111, no 27, p. 9798-9803. DOI: 10.1073/pnas.1402597111. [DB: Biological Abstracts, Scopus, MEDLINE, Elsevier Biobase, Science Citation Index Expanded (Web of Science)] [IF: 9.674; AIF: 5.269; Q1 (2014 InCities JCR SCIE)]
2 Gasiūnas, Giedrius; Karvelis, Tautvydas; Šikšnys, Virginijus. Cas9 - a programmable RNA-guided DNA endonuclease from the bacterial adaptive immune system // COINS 2014 : conference of natural and life sciences. Vilnius : Vilniaus universiteto leidykla. 2014, p. 21-22. Prieiga per internetą: <http://pub.vusa.lt/Info.com/Coins/COINS2014.pdf> [žiūrėta 2014-07-16].
3 Bigelytė, Greta; Karvelis, Tautvydas; Gasiūnas, Giedrius. Fermentų, dalyvaujančių II tipo CRISPR-CAS sistemų RNR brendime, paieška // Studentų mokslinė praktika 2014 : konferencijos pranešimų santraukos. D. 2. Vilnius : Lietuvos mokslo taryba, 2014. ISBN 9786094170911. p. 20-21. Prieiga per internetą: <http://studentai.lmt.lt/DOKUMENTAI/KONFERENCIJOS/LMT_knyga-II_d.pdf> [žiūrėta 2014-10-22].
4 Gasiūnas, Giedrius; Šinkūnas, Tomas; Šikšnys, Virginijus. Molecular mechanisms of CRISPR-mediated microbial immunity // Cellular and molecular life sciences. Basel : Birkhaeuser Science. ISSN 1420-682X. 2014, vol. 71, iss. 3, p. 449-465. DOI: 10.1007/s00018-013-1438-6. [DB: MEDLINE, Scopus, Biobase, CABI Abstracts Databases, Science Citation Index Expanded (Web of Science)] [IF: 5.808; AIF: 4.964; Q1 (2014 InCities JCR SCIE)]

2013
1 Šinkūnas, Tomas; Gasiūnas, Giedrius; Waghmare, Sakharam; Barrangou, Rodolphe; Horvath, Philippe; Šikšnys, Virginijus. In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus // The EMBO journal. London : Nature Publishing Group. ISSN 0261-4189. 2013, vol. 32, no. 3, p. 385-394. DOI: 10.1038/emboj.2012.352. [DB: CABI Abstracts Databases, BIOSIS Previews, Science Citation Index Expanded (Web of Science)] [IF: 10.748; AIF: 5.064; Q1 (2013 InCities JCR SCIE)]
2 Karvelis, Tautvydas; Gasiūnas, Giedrius; Mikšys, Algirdas; Barrangou, Rodolphe; Horvath, Philippe; Šikšnys, Virginijus. crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus // RNA biology. Austin : Landes Bioscience. ISSN 1547-6286. 2013, vol. 10, no. 5, p. 841-851. DOI: 10.4161/rna.24203. [DB: MEDLINE, Chemical abstracts, Science Citation Index Expanded (Web of Science)] [IF: 5.377; AIF: 4.311; Q1 (2013 InCities JCR SCIE)]
3 Horvath, Philippe; Gasiūnas, Giedrius; Šikšnys, Virginijus; Barrangou, Rodolphe. Applications of the versatile CRISPR-Cas systems // CRISPR-Cas systems: RNA-mediated adaptive immunity in bacteria and archaea /Editors: Rodolphe Barrangou, John van der Oost. Springer, 2013. ISBN 9783642346576. p. 267-286. Prieiga per internetą: <http://link.springer.com/content/pdf/10.1007%2F978-3-642-34657-6_11.pdf> [žiūrėta 2013-08-21].
4 Gasiūnas, Giedrius; Karvelis, Tautvydas; Barrangou, Rodolphe; Horvath, Philippe; Šikšnys, Virginijus. Cas9 – a programmable RNA-guided DNA endonuclease from the bacterial adaptive immune system // The FEBS Journal. Oxford : Wiley-Blackwell Publishing Ltd. ISSN 1742-464X. 2013, vol. 280, suppl. 1, p. 80. Prieiga per internetą: <http://onlinelibrary.wiley.com/doi/10.1111/febs.12340/pdf> [žiūrėta 2013-11-06]. [DB: Chemical abstracts, Index Medicus, Current Awareness in Biological Sciences, AgBiotech News and Information, Science Citation Index Expanded (Web of Science)] [IF: 3.986; AIF: 4.311; Q2 (2013 InCities JCR SCIE)]
5 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo); Lubys, Arvydas (autorius, išradimo); Zaliauskienė, Lolita (autorius, išradimo); Glemžaitė, Monika (autorius, išradimo); Smith, Anja (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex : WIPO/PCT patent 2013/142578 A1. WO2013142578 A1. 2012-03-20. Prieiga per internetą: <http://www.google.com/patents/WO2013142578A1?cl=en> [žiūrėta 2013-11-07].
6 Šikšnys, Virginijus (autorius, išradimo); Gasiūnas, Giedrius (autorius, išradimo); Karvelis, Tautvydas (autorius, išradimo). RNA-directed DNA cleavage by the Cas9-crRNA complex : WIPO/PCT patent 2013/141680 A1. WO2013141680 A1. 2012-03-20. [43 p.]. Prieiga per internetą: <https://patentscope.wipo.int/search/en/detail.jsf;jsessionid=3999AF8EDFD7C30C3A246932F2E7DAF4.wapp2nA?docId=WO2013142578&recNum=12&maxRec=22125&office=&prevFilter=&sortOption=&queryString=streptococc*&tab=PCT+Biblio> [žiūrėta 2013-11-07].
7 Karvelis, Tautvydas; Gasiūnas, Giedrius; Šikšnys, Virginijus. Programmable DNA cleavage in vitro by Cas9 // Biochemical Society transactions. London : Portland Press Ltd. ISSN 0300-5127. 2013, vol. 41, part. 6, p. 1401-1406. DOI: 10.1042/BST20130164. [DB: Embase, ISI Web of Science (nenaudotinas), MEDLINE, ProQuest (nenaudotinas), GeoRef, PubMed, Scopus, EBSCOHost (nenaudotinas), IBZ - Internationale Bibliographie der Geistes- und Sozialwissenschaftlichen Zeitschriftenliteratur, Chemical abstracts, CABI Abstracts Databases] [IF: 3.238; AIF: 4.311; Q2 (2013 InCities JCR SCIE)]
8 Gasiūnas, Giedrius; Šikšnys, Virginijus. RNA-dependent DNA endonuclease Cas9 of the CRISPR system: Holy Grail of genome editing? // Trends in microbiology. Oxford : Elsevier Ltd. ISSN 0966-842X. 2013, vol. 21, iss. 11, p. 562-567. DOI: 10.1016/j.tim.2013.09.001. [DB: Science Citation Index Expanded (Web of Science), CABI Abstracts Databases, Biobase, Scopus, MEDLINE] [IF: 9.808; AIF: 3.992; Q1 (2013 InCities JCR SCIE)]

2012
1 Gasiūnas, Giedrius; Barrangou, Rodolphe; Horvath, Philippe; Šikšnys, Virginijus. Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria // PNAS : Proceedings of the National Academy of Sciences. Washington : National Academy of Sciences. ISSN 0027-8424. 2012, vol. 109, no. 39, p. E2579-E2586. DOI: 10.1073/pnas.1208507109. [DB: Biological Abstracts, Scopus, MEDLINE, Elsevier Biobase, Science Citation Index Expanded (Web of Science)] [IF: 9.737; AIF: 6.803; Q1 (2012 InCities JCR SCIE)]
2 Gasiūnas, Giedrius. Mechanism of DNA interference in a bacterial adaptive immune system // Bioateitis: gamtos ir gyvybės mokslų perspektyvos : 2012 m. jaunųjų mokslininkų konferencijos pranešimų santraukos. Vilnius : LMA leidykla. 2012, p. 7.

2011
1 Šinkūnas, Tomas; Gasiūnas, Giedrius; Fremaux, Christophe; Barrangou, Rodolphe; Horvath, Philippe; Šikšnys, Virginijus. Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system // The EMBO journal. London : Nature Publishing Group. ISSN 0261-4189. 2011, vol. 30, no. 7, p. 1335-1342. DOI: 10.1038/emboj.2011.41. [DB: CABI Abstracts Databases, BIOSIS Previews, Science Citation Index Expanded (Web of Science)] [IF: 9.205; AIF: 5.017; Q1 (2011 InCities JCR SCIE)]
2 Šapranauskas, Rimantas; Gasiūnas, Giedrius; Fremaux, Christophe; Barrangou, Rodolphe; Horvath, Philippe; Šikšnys, Virginijus. The Streptococcus thermophilus CRISPR/Cas system provides immunity in Escherichia coli // Nucleic acids research. Oxford : Oxford University Press. ISSN 0305-1048. 2011, Vol. 39, no 21, p. 9275-9282. DOI: 10.1093/nar/gkr606. [DB: Science Citation Index Expanded (Web of Science), CAB Abstracts, MEDLINE] [IF: 8.026; AIF: 4.273; Q1 (2011 InCities JCR SCIE)]